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From: ambrosia nightwish on 18 Mar 2010 08:37
please can anybody help me:
i used the FCGR toolbox of Jesús Mena-Chalco for the 'AE016879.fasta' sequence and when i runned it, it show me this message:
Error using ==> eval
Reference to non-existent field 'B'.

Error in ==> fcgr2 at 63
eval([pathOfTree '=' pathOfTree '+1;']);
i tried to change the dna reading function and it told me the same thing:
Error using ==> eval
Reference to non-existent field 'a'.

Error in ==> fcgr2 at 63
eval([pathOfTree '=' pathOfTree '+1;']);

i tried this programm with 'celegans' and it is working. what shall i do to make it work??
From: Jesus on 18 Mar 2010 17:11
Ambrosia,

This script only works with Fasta files with all letters in uppercases. I suggest you convert the fasta file to uppercase fasta file.

Please comment or correct me.

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frmsrcurl: http://compgroups.net/comp.soft-sys.matlab/FCGR
From: ambrosia nightwish on 20 Mar 2010 11:28
I will try to apply what you advised me to do and i will tel you the result, thank you alot.
From: ambrosia nightwish on 22 Mar 2010 19:20
Mr Jesus ,
The program works for all the sequences which I have now, I'm thanking you very well. I have another question please: I want to invert colors in the images that we obtain the light one to indicate the low frequencies and the somber one for high frequencies can you tell me how to procede? Thank you .
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