From: Lee Samuel on 12 May 2010 08:26 i use the bioinformation toolbar, however i cannot read a fasta file from NCBI use the funtion "getgenbank". By the way how to add a fasta file from my computer ?
From: Ashish Uthama on 12 May 2010 08:59 On Wed, 12 May 2010 08:26:04 -0400, Lee Samuel <lyy005(a)hotmail.com> wrote: > i use the bioinformation toolbar, however i cannot read a fasta file > from NCBI use the funtion "getgenbank". By the way how to add a fasta > file from my computer ? http://www.mathworks.com/access/helpdesk/help/toolbox/bioinfo/ref/fastaread.html ?
From: Lee Samuel on 12 May 2010 09:35 "Ashish Uthama" <first.last(a)mathworks.com> wrote in message <op.vclfo51za5ziv5(a)uthamaa.dhcp.mathworks.com>... > On Wed, 12 May 2010 08:26:04 -0400, Lee Samuel <lyy005(a)hotmail.com> wrote: > > > i use the bioinformation toolbar, however i cannot read a fasta file > > from NCBI use the funtion "getgenbank". By the way how to add a fasta > > file from my computer ? > > http://www.mathworks.com/access/helpdesk/help/toolbox/bioinfo/ref/fastaread.html > ? Thank you very much~
From: Lucio Cetto on 12 May 2010 13:04 You may also want to look at the option 'SequenceOnly' in getgenbank, this will only fetch the sequence instead of the whole genbank entry. HTH Lucio
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